Gene: AT5G22000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G22000
  • Transcript Identifier AT5G22000.1
  • Gene Type Coding gene
  • Location Chr5 : 7277436-7279553 : positive

Gene Family Information

  • ID HOM05D001689
  • #Genes/#Species 383/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G22000.1
  • symbol RHF2A
  • uniprot Q9ZT42

Descriptions

  • Description RING-H2 group F2A
  • Computational description RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 8011 Blast hits to 5867 proteins in 317 species: Archae - 0; Bacteria - 141; Metazoa - 1822; Fungi - 396; Plants - 2620; Viruses - 42; Other Eukaryotes - 2990 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0009561
IGI
Gene Ontologymegagametogenesis1
GO:0051603
IGI
Gene Ontologyproteolysis involved in cellular protein catabolic process1
GO:0051726
IGI
Gene Ontologyregulation of cell cycle1
GO:0055046
IGI
Gene Ontologymicrogametogenesis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
Gene Ontologyubiquitin-protein transferase activity2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
13.7.4.4 Cell cycle organisation.germline development.embryogenesis.E3 ubiquitin protein ligase (RHF)