Gene: Sopen06g029670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g029670
  • Transcript Identifier Sopen06g029670.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 55899774-55901296 : negative

Gene Family Information

  • ID HOM05D001768
  • #Genes/#Species 368/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g029670.1

Descriptions

  • Description Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2. | PIGGYBACK2 (PGY2) | FUNCTIONS IN: structural constituent of ribosome, rRNA binding | INVOLVED IN: adaxial/abaxial pattern formation, translation | LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 , Ribosomal protein L6, alpha-beta domain , Ribosomal protein L6, conserved site-2 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0009955
ISO
PLAZA Integrative Orthologyadaxial/abaxial pattern specification AT1G33140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
InterProrRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G33140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G33120
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G33120
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G33120
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G33120
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT1G33120
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G33120
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G33120
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G33120
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G33120
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT4G10450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036789 Ribosomal protein L6, alpha-beta domain superfamily
IPR020040 Ribosomal protein L6, alpha-beta domain
IPR000702 Ribosomal protein L6
Mapman id Description
17.1.2.1.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL9