Gene: AT4G10450

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G10450
  • Transcript Identifier AT4G10450.1
  • Gene Type Coding gene
  • Location Chr4 : 6463201-6464458 : negative

Gene Family Information

  • ID HOM05D001768
  • #Genes/#Species 368/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G10450.1
  • uniprot Q9SZX9

Descriptions

  • Description Ribosomal protein L6 family
  • Computational description Ribosomal protein L6 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33140.1); Has 2629 Blast hits to 2626 proteins in 920 species: Archae - 312; Bacteria - 1081; Metazoa - 421; Fungi - 181; Plants - 347; Viruses - 0; Other Eukaryotes - 287 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002181
IBA
Gene Ontologycytoplasmic translation1
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IEA
Gene OntologyrRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
IEA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 4
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005829
HDA
Gene Ontologycytosol5
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000702 Ribosomal protein L6
IPR036789 Ribosomal protein L6, alpha-beta domain superfamily
IPR020040 Ribosomal protein L6, alpha-beta domain
Mapman id Description
17.1.2.1.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL9