Gene: Sopen06g025660
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g025660
- Transcript Identifier Sopen06g025660.1
- Gene Type Coding gene
- Location Spenn-ch06 : 52894529-52898096 : positive
Gene Family Information
- ID HOM05D001080
- #Genes/#Species 568/100
- Phylogenetic origin
- ID ORTHO05D001081
- #Genes/#Species 495/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g025660.1
Descriptions
- Description Ribosomal protein L30/L7 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal , Ribosomal protein L30p/L7e, conserved region , Ribosomal protein L30, conserved site , Ribosomal protein L30, ferredoxin-like fold domain | BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000463 | IEA | InterPro | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022625 | IEA | InterPro | cytosolic large ribosomal subunit | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G80750 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G80750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035808 | Ribosomal protein L7, eukaryotic/archaeal |
| IPR005998 | Ribosomal protein L7, eukaryotic |
| IPR012988 | Ribosomal protein L30, N-terminal |
| IPR039699 | Ribosomal protein L7/L30 |
| IPR036919 | Ribosomal protein L30, ferredoxin-like fold domain superfamily |
| IPR016082 | Ribosomal protein L30, ferredoxin-like fold domain |
| Mapman id | Description |
|---|---|
| 17.1.2.1.5 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL7 |