Gene: Sopen06g024880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g024880
  • Transcript Identifier Sopen06g024880.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 52342566-52358431 : negative

Gene Family Information

  • ID HOM05D003521
  • #Genes/#Species 194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g024880.1

Descriptions

  • Description This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c). | golgin candidate 5 (GC5) | FUNCTIONS IN: protein binding | INVOLVED IN: biological_process unknown | LOCATED IN: Golgi apparatus, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding , TATA element modulatory factor 1 TATA binding .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G79830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G79830
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G79830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022091 TATA element modulatory factor 1, TATA binding
IPR022092 TATA element modulatory factor 1 DNA binding
Mapman id Description
22.3.4.10.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.Golgin-mediated tethering.golgin (GC5/TMF)