Gene: AT1G79830

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79830
  • Transcript Identifier AT1G79830.3
  • Gene Type Coding gene
  • Location Chr1 : 30028110-30033508 : negative

Gene Family Information

  • ID HOM05D003521
  • #Genes/#Species 194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79830.3
  • symbol GC5
  • full_name golgin candidate 5
  • uniprot Q0WVL7

Descriptions

  • Description golgin Putative 5
  • Computational description golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091); Has 167116 Blast hits to 92088 proteins in 3687 species: Archae - 2004; Bacteria - 38214; Metazoa - 68462; Fungi - 14168; Plants - 9575; Viruses - 617; Other Eukaryotes - 34076 (source: NCBI BLink).
  • Computational description golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm1
GO:0005634
HDA
Gene Ontologynucleus2
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
Gene OntologyGolgi apparatus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022091 TATA element modulatory factor 1, TATA binding
IPR022092 TATA element modulatory factor 1 DNA binding
Mapman id Description
22.3.4.10.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.Golgin-mediated tethering.golgin (GC5/TMF)