Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 0.0e+00 1645.6 1012 100.0
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 0.0e+00 1578.1 1012 96.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 0.0e+00 1384.4 1021 83.5
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 0.0e+00 1376.3 1033 82.0
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 0.0e+00 1366.7 1017 84.5
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 0.0e+00 1290.0 1039 76.9
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.8e-286 989.6 1021 61.3
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.4e-285 985.3 1022 60.7
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 2.5e-280 969.1 1028 60.7
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 9.3e-275 950.7 1047 59.3
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 3.5e-274 948.7 1025 61.4
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 4.6e-274 948.3 1023 60.3
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 3.1e-270 935.6 1027 60.3
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.2e-269 933.7 1041 59.3
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 5.0e-268 928.3 1027 58.7
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.4e-267 926.8 1033 59.1
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.9e-267 926.4 1020 61.7
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 4.2e-267 925.2 1029 60.5
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.2e-267 925.2 1029 59.3
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 5.5e-267 924.9 1049 58.4
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 5.5e-267 924.9 1036 59.1
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 1.6e-266 923.3 1033 59.1
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.7e-266 922.5 1044 58.2
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 2.7e-266 922.5 708 76.7
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.6e-266 922.2 1028 58.3
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 7.9e-266 921.0 1026 59.6
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.4e-265 920.2 1037 59.2
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.4e-265 920.2 1037 60.0
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.4e-265 920.2 1024 60.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 3.9e-265 918.7 1103 58.1
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 5.1e-265 918.3 1031 61.1
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.1e-264 917.1 1048 57.4
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.9e-264 916.4 1038 62.3
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 5.7e-264 914.8 1031 61.5
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.1e-262 909.1 1031 58.6
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 6.9e-262 907.9 1028 57.5
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 2.0e-261 906.4 1034 59.8
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.7e-260 903.3 1048 57.2
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.5e-259 898.3 1038 56.7
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 9.4e-259 897.5 1013 57.2
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.2e-258 897.1 1019 58.5
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.6e-258 896.7 1011 58.9
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.1e-258 896.3 1019 57.1
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 7.9e-258 894.4 1059 56.2
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 7.9e-258 894.4 1052 56.6
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.5e-256 890.2 1055 57.4
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 4.4e-256 888.6 1030 58.3
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.7e-255 886.7 1015 57.5
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.2e-255 886.3 1048 57.7
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 8.2e-255 884.4 1020 57.4
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.1e-254 884.0 1016 56.4
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.4e-254 882.9 1042 57.0
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 3.1e-254 882.5 1037 56.3
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 4.1e-254 882.1 1060 57.2
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 5.3e-254 881.7 1019 56.3
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 3.4e-253 879.0 1038 55.8
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 3.4e-253 879.0 1037 58.7
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.7e-252 876.7 1012 56.9
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.7e-252 876.7 1041 61.9
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 2.5e-251 872.8 1182 53.2
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 3.2e-251 872.5 1008 56.7
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.2e-251 872.1 1028 58.0
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 7.2e-251 871.3 1032 57.5
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.6e-250 870.2 1014 55.9
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.6e-250 870.2 1025 56.7
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 3.6e-250 869.0 1016 55.5
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 4.7e-250 868.6 1015 56.4
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.1e-248 864.0 1039 55.7
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.0e-248 863.2 1031 56.8
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 7.4e-248 861.3 1023 57.4
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.3e-247 860.5 1009 56.4
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.3e-247 860.5 1029 58.1
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 3.1e-246 855.9 1026 55.8
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 3.1e-246 855.9 1025 56.1
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 7.0e-246 854.7 1025 57.3
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 9.1e-246 854.4 1057 54.3
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.5e-245 852.4 1034 58.5
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 4.5e-245 852.0 1034 56.4
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 7.7e-245 851.3 1021 55.8
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.0e-244 850.9 1024 56.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.7e-244 850.1 1032 55.5
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.7e-244 850.1 1025 56.4
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 5.0e-244 848.6 1022 56.4
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 8.5e-244 847.8 1001 56.3
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.9e-243 846.7 1135 52.0
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 3.6e-242 842.4 1035 58.6
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.8e-241 840.1 1024 56.3
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.8e-241 840.1 1045 55.5
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.8e-241 840.1 1034 56.8
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.2e-239 833.2 1035 55.4
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 5.3e-238 828.6 1043 53.7
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.6e-237 827.0 1034 55.7
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 5.9e-237 825.1 1030 56.6
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 1.3e-236 823.9 1045 53.3
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.5e-235 819.7 1151 50.7
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.5e-235 819.7 1019 54.4
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 2.1e-234 816.6 1038 54.1
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 2.3e-233 813.1 1055 56.8
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.0e-233 812.8 1012 55.4
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.5e-232 810.4 1028 53.6
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.5e-232 810.4 1043 53.9
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.1e-230 804.3 1054 52.8
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 2.4e-230 803.1 1027 54.4
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 5.9e-229 798.5 1025 53.8
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 6.6e-228 795.0 1060 52.0
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.9e-227 793.5 1024 54.3
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 2.1e-226 790.0 1042 52.0
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.4e-225 787.3 1024 52.8
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 6.8e-225 785.0 1050 55.2
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 8.9e-225 784.6 1017 55.9
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 8.3e-223 778.1 1011 53.1
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.3e-220 770.0 1019 52.0
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 2.3e-220 770.0 1028 52.6
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.4e-214 750.7 1049 51.6
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 2.2e-207 726.9 1047 50.4
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 3.0e-196 689.9 1061 49.1
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 4.3e-195 686.0 1065 47.8
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 2.2e-183 647.1 1018 47.7
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 1.7e-180 637.5 1112 44.2
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 2.2e-175 620.5 478 76.8
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.4e-166 591.3 1039 42.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 3.2e-166 590.1 935 46.8
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.2e-154 550.8 1027 42.1
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 8.2e-154 548.9 813 48.7
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 7.7e-152 542.3 557 63.4
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.2e-150 537.0 618 56.0
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 8.0e-133 479.2 751 45.7
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 3.8e-111 407.1 392 63.0
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 2.1e-101 374.8 1065 32.8
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 1.9e-73 282.0 341 57.8
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 1.9e-73 282.0 544 46.0
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.1e-68 266.2 525 42.3
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 5.8e-51 207.2 188 69.1
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.9e-50 204.1 315 48.9
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 1.2e-48 199.5 158 75.3
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 7.9e-48 196.8 137 80.3
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 8.7e-47 193.4 199 60.3
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 8.2e-45 186.8 326 41.4
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 9.3e-41 173.3 716 30.4
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.8e-36 159.1 244 48.8
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 1.8e-36 159.1 363 38.8
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 6.5e-34 150.6 421 39.2
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-31 143.3 120 71.7
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 4.3e-30 137.9 492 32.5
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 2.2e-29 135.6 90 82.2
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.1e-28 131.3 88 78.4
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 4.1e-28 131.3 87 81.6
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.5e-27 129.4 91 79.1
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.7e-26 125.9 111 65.8
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 2.2e-26 125.6 106 65.1
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 8.5e-26 123.6 100 72.0
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 1.1e-25 123.2 417 31.7
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 9.4e-25 120.2 685 25.8
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.6e-24 119.4 99 69.7
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 2.1e-24 119.0 493 30.0
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.4e-23 116.3 354 31.9
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.3e-23 115.5 117 58.1
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.0e-23 115.2 643 25.3
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.7e-21 109.4 84 71.4
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 8.2e-21 107.1 471 34.2
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 8.2e-21 107.1 589 28.5
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 5.3e-20 104.4 156 49.4
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 7.0e-20 104.0 63 82.5
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 8.5e-18 97.1 196 41.8
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.0e-15 88.2 88 59.1
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 4.0e-15 88.2 60 81.7
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 4.0e-15 88.2 118 50.8
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 1.5e-14 86.3 74 64.9
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 2.2e-13 82.4 73 68.5
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 8.2e-13 80.5 65 67.7
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 3.1e-12 78.6 82 57.3
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 7.0e-12 77.4 71 64.8
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 3.5e-11 75.1 97 50.5
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 3.8e-10 71.6 75 56.0
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 7.2e-09 67.4 43 81.4
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 9.4e-09 67.0 79 51.9
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.0e-07 63.5 329 24.6
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 5.2e-07 61.2 47 68.1
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 6.8e-07 60.8 45 68.9
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 8.8e-07 60.5 75 52.0
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 3.4e-06 58.5 45 62.2


User provided reference genes

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