Gene: Sopen06g018620

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g018620
  • Transcript Identifier Sopen06g018620.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 45897744-45906320 : negative

Gene Family Information

  • ID HOM05D001130
  • #Genes/#Species 546/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g018620.1

Descriptions

  • Description encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. | no pollen germination related 2 (NPGR2) | FUNCTIONS IN: calmodulin binding | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT4G28600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031234
ISO
PLAZA Integrative Orthologyextrinsic component of cytoplasmic side of plasma membrane AT4G28600
GO:0098857
ISO
PLAZA Integrative Orthologymembrane microdomain AT4G28600
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G28600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019734 Tetratricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR043376 Protein NPG1-like
Mapman id Description
35.1 not assigned.annotated