Gene: AT4G28600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G28600
  • Transcript Identifier AT4G28600.3
  • Gene Type Coding gene
  • Location Chr4 : 14130046-14132599 : positive

Gene Family Information

  • ID HOM05D001130
  • #Genes/#Species 546/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G28600.3
  • symbol NPGR2
  • uniprot Q66GN3

Descriptions

  • Description no pollen germination related 2
  • Computational description no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005516
TAS
Gene Ontologycalmodulin binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA, HDA
Gene Ontologyplasma membrane2 3
GO:0031234
IDA
Gene Ontologyextrinsic component of cytoplasmic side of plasma membrane3
GO:0098857
IDA
Gene Ontologymembrane microdomain3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR043376 Protein NPG1-like
Mapman id Description
35.1 not assigned.annotated