Gene: Sopen06g017870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g017870
  • Transcript Identifier Sopen06g017870.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 45006619-45007725 : positive

Gene Family Information

  • ID HOM05D000497
  • #Genes/#Species 1068/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g017870.1

Descriptions

  • Description encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. | cytokinin response factor 4 (CRF4) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: cytokinin response factor 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G61630
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G61630
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT3G61630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61630
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G61630
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G61630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)