Gene: AT3G61630
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G61630
- Transcript Identifier AT3G61630.1
- Gene Type Coding gene
- Location Chr3 : 22805274-22806221 : positive
Gene Family Information
- ID HOM05D000497
- #Genes/#Species 1068/91
- Phylogenetic origin
- ID ORTHO05D000020
- #Genes/#Species 4054/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G61630.1
- symbol CRF6
- uniprot Q9M374
Descriptions
- Description cytokinin response factor 6
- Computational description cytokinin response factor 6 (CRF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 5 (TAIR:AT2G46310.1); Has 5693 Blast hits to 5625 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5682; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | Solyc01g095500.3 |
GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Solyc01g095500.3 |
GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
GO:0009736 | IEA | GOA Database | cytokinin-activated signaling pathway | |
GO:0048825 | IMP | Gene Ontology | cotyledon development | 1 |
GO:0048366 | IMP | Gene Ontology | leaf development | 1 |
GO:0009793 | IGI | Gene Ontology | embryo development ending in seed dormancy | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 3 |
GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | IDA | Gene Ontology | cytoplasm | 5 |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM | Gene Ontology | nucleus | 5 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |