Gene: Sopen06g013510

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g013510
  • Transcript Identifier Sopen06g013510.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 35610046-35620038 : positive

Gene Family Information

  • ID HOM05D004573
  • #Genes/#Species 158/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g013510.1

Descriptions

  • Description protein affected traf, #64257, cking 2 (PAT2) | FUNCTIONS IN: protein transporter activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport, endocytosis, protein transport | LOCATED IN: membrane coat, Golgi apparatus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-3, beta subunit , Armadillo-like helical , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, N-terminal | BEST Arabidopsis thaliana protein match is: Adaptin family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0080171
ISO
PLAZA Integrative Orthologylytic vacuole organization AT3G55480
GO:0051453
ISO
PLAZA Integrative Orthologyregulation of intracellular pH AT3G55480
GO:0006896
ISO
PLAZA Integrative OrthologyGolgi to vacuole transport AT3G55480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030123
IEA
InterProAP-3 adaptor complex
GO:0030117
IEA
InterPromembrane coat

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR026739 AP complex subunit beta
IPR029390 AP-3 complex subunit beta, C-terminal domain
IPR026740 AP-3 complex subunit beta
IPR011989 Armadillo-like helical
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
Mapman id Description
22.3.1.4.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-3 cargo adaptor complex.large subunit beta (AP3B)