Gene: Sopen06g006060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g006060
  • Transcript Identifier Sopen06g006060.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 9051088-9097589 : positive

Gene Family Information

  • ID HOM05D000422
  • #Genes/#Species 1214/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g006060.1

Descriptions

  • Description Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress. | casein lytic proteinase B4 (CLPB4) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | INVOLVED IN: response to heat | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal , ATPase, AAA type, core , ATPase, AAA-2 , ATPase, AAA-type, core , Chaperonin clpA/B , Chaperonin ClpB , Chaperonin ClpA/B, conserved site , Clp, N-terminal | BEST Arabidopsis thaliana protein match is: casein lytic proteinase B3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009408
IEA
InterProresponse to heat
GO:0042026
IEA
InterProprotein refolding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G25140
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G25140
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G25140
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G25140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR019489 Clp ATPase, C-terminal
IPR036628 Clp, N-terminal domain superfamily
IPR041546 ClpA/ClpB, AAA lid domain
IPR003593 AAA+ ATPase domain
IPR001270 ClpA/B family
IPR017730 Chaperonin ClpB
IPR004176 Clp, repeat (R) domain
Mapman id Description
26.4.2.4 External stimuli response.temperature.heat response.organellar chaperone (Clp-p/Clp-m)