Gene: AT2G25140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G25140
  • Transcript Identifier AT2G25140.1
  • Gene Type Coding gene
  • Location Chr2 : 10697877-10701998 : negative

Gene Family Information

  • ID HOM05D000422
  • #Genes/#Species 1214/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G25140.1
  • symbol CLPB4
  • Alias CLPB-M,CASEIN LYTIC PROTEINASE B-M,HSP98.7,HEAT SHOCK PROTEIN 98.7
  • uniprot Q8VYJ7

Descriptions

  • Description casein lytic proteinase B4
  • Computational description casein lytic proteinase B4 (CLPB4); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to heat; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B3 (TAIR:AT5G15450.1); Has 30488 Blast hits to 27328 proteins in 3166 species: Archae - 421; Bacteria - 19864; Metazoa - 870; Fungi - 613; Plants - 740; Viruses - 7; Other Eukaryotes - 7973 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042026
IEA
Gene Ontologyprotein refolding
GO:0042026
IEA
InterProprotein refolding
GO:0009408
IEA
GOA Databaseresponse to heat
GO:0009408
IEA
InterProresponse to heat
GO:0034605
IBA
Gene Ontologycellular response to heat1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IBA
Gene OntologyATP hydrolysis activity1
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005737
IEA
InterProcytoplasm
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma2
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
Gene Ontologymitochondrion4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036628 Clp, N-terminal domain superfamily
IPR003959 ATPase, AAA-type, core
IPR041546 ClpA/ClpB, AAA lid domain
IPR019489 Clp ATPase, C-terminal
IPR004176 Clp, repeat (R) domain
IPR003593 AAA+ ATPase domain
IPR017730 Chaperonin ClpB
IPR001270 ClpA/B family
Mapman id Description
26.4.2.4 External stimuli response.temperature.heat response.organellar chaperone (Clp-p/Clp-m)