Gene: Sopen06g001790

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g001790
  • Transcript Identifier Sopen06g001790.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 946959-949144 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g001790.1

Descriptions

  • Description Ras-related protein Rab11C - Lotus japonicus, RAB GTPase homolog A2B (RABA2b) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction | LOCATED IN: endosome, plasma membrane, cell plate | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Ran GTPase , ADP-ribosylation factor , Ras , Ras small GTPase, Ras type , Rab11-related , Small GTPase, Rho type , Ras GTPase , Small GTP-binding protein , Small GTPase , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT1G07410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G46830
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G46830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G46830
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT3G46830
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G46830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase