Gene: AT1G07410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G07410
  • Transcript Identifier AT1G07410.1
  • Gene Type Coding gene
  • Location Chr1 : 2276270-2277154 : positive

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G07410.1
  • symbol RABA2b
  • Alias ATRAB-A2B,ARABIDOPSIS RAB GTPASE HOMOLOG A2B,ATRABA2B,RAB GTPase homolog A2B,RAB-A2B,RAB GTPASE HOMOLOG A2B
  • uniprot Q9LNW1

Descriptions

  • Description RAB GTPase homolog A2B
  • Computational description RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0042546
IMP
Gene Ontologycell wall biogenesis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010008
IEA
GOA Databaseendosome membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IDA
IBA
Gene Ontologyendosome2 3
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane4
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IBA
Gene OntologyGolgi apparatus3
GO:0009504
IDA
Gene Ontologycell plate2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase