Gene: Sopen06g001290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g001290
  • Transcript Identifier Sopen06g001290.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 388761-389379 : negative

Gene Family Information

  • ID HOM05D000293
  • #Genes/#Species 1516/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g001290.1

Descriptions

  • Description Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons. | myb domain protein 48 (MYB48) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Myb, DNA-binding , Homeodomain-like , Myb transcription factor , HTH transcriptional regulator, Myb-type, DNA-binding , MYB-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: myb domain protein 59 ., Myb-related protein MYBAS2 - Oryza sativa (Rice)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0043266
ISO
PLAZA Integrative Orthologyregulation of potassium ion transport AT5G59780
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT5G59780
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin Solyc06g005310.3
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc06g005310.3
GO:0035865
ISO
PLAZA Integrative Orthologycellular response to potassium ion AT5G59780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G59780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G59780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR044676 MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930 Myb domain
Mapman id Description
35.1 not assigned.annotated