Gene: Solyc06g005310.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g005310.3
- Transcript Identifier Solyc06g005310.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 350581-351184 : negative
Gene Family Information
- ID HOM05D000293
- #Genes/#Species 1516/92
- Phylogenetic origin
- ID ORTHO05D000180
- #Genes/#Species 1478/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g005310.3.1
- uniprot A0A3Q7GRB8
- gene_id Solyc06g005310
Descriptions
- Description Transcription factor MYB48 (AHRD V3.3 *** A0A2G2Z7N5_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009735 | IDA | Gene Ontology | response to cytokinin | 1 |
| GO:0009733 | IDA | Gene Ontology | response to auxin | 1 |
| GO:0006355 | IBA IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0043266 | ISO | PLAZA Integrative Orthology | regulation of potassium ion transport | AT5G59780 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G59780 |
| GO:0035865 | ISO | PLAZA Integrative Orthology | cellular response to potassium ion | AT5G59780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IBA IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G59780 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |