Gene: AT5G59780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G59780
  • Transcript Identifier AT5G59780.1
  • Gene Type Coding gene
  • Location Chr5 : 24082425-24083044 : negative

Gene Family Information

  • ID HOM05D000293
  • #Genes/#Species 1516/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G59780.1
  • symbol MYB59
  • Alias ATMYB59-1,ATMYB59-2,ATMYB59-3,ATMYB59,MYB DOMAIN PROTEIN 59
  • uniprot Q4JL84

Descriptions

  • Description myb domain protein 59
  • Computational description myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.3); Has 5767 Blast hits to 5764 proteins in 359 species: Archae - 0; Bacteria - 0; Metazoa - 308; Fungi - 94; Plants - 4827; Viruses - 3; Other Eukaryotes - 535 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0043266
IMP
Gene Ontologyregulation of potassium ion transport2
GO:0035865
IMP
Gene Ontologycellular response to potassium ion2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IDA
IBA
Gene Ontologysequence-specific DNA binding1 2
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IPI
ISS
Gene OntologyDNA-binding transcription factor activity2 3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044676 MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
35.1 not assigned.annotated