Gene: Sopen05g034730
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g034730
- Transcript Identifier Sopen05g034730.1
- Gene Type Coding gene
- Location Spenn-ch05 : 77770639-77785112 : negative
Gene Family Information
- ID HOM05D003684
- #Genes/#Species 186/97
- Phylogenetic origin
- ID ORTHO05D004428
- #Genes/#Species 181/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen05g034730.1
Descriptions
- Description FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016575 | IEA | InterPro | histone deacetylation | |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G08450 |
| GO:1902074 | ISO | PLAZA Integrative Orthology | response to salt | AT5G08450 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT5G08450 |
| GO:0080186 | ISO | PLAZA Integrative Orthology | developmental vegetative growth | AT5G08450 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT5G08450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G08450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G08450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.2.5 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component HDC1/Rxt3 |