Gene: Sopen05g029470

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g029470
  • Transcript Identifier Sopen05g029470.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 73084403-73087206 : negative

Gene Family Information

  • ID HOM05D000922
  • #Genes/#Species 652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g029470.1

Descriptions

  • Description 40S ribosomal protein S13 - Glycine max (Soybean), Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development | ribosomal protein S13A (RPS13A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation | LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal , Ribosomal protein S15 , S15/NS1, RNA-binding | BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT4G00100
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT4G00100
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT4G00100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G00100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G60770
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT4G00100
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G60770
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G60770
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G00100
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G00100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012606 Ribosomal protein S13/S15, N-terminal
IPR000589 Ribosomal protein S15
IPR009068 S15/NS1, RNA-binding
IPR023029 Ribosomal protein S15P
Mapman id Description
17.1.3.1.14 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS13