Gene: AT3G60770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G60770
  • Transcript Identifier AT3G60770.1
  • Gene Type Coding gene
  • Location Chr3 : 22460525-22461656 : negative

Gene Family Information

  • ID HOM05D000922
  • #Genes/#Species 652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G60770.1
  • uniprot P59223

Descriptions

  • Description Ribosomal protein S13/S15
  • Computational description Ribosomal protein S13/S15; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: ribosomal protein S13A (TAIR:AT4G00100.1); Has 1099 Blast hits to 1099 proteins in 415 species: Archae - 259; Bacteria - 0; Metazoa - 342; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT4G00100
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT4G00100
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT4G00100
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G00100
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0070181
IBA
Gene Ontologysmall ribosomal subunit rRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IDA
GOA Databasecell wall
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G00100
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol2
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
IBA
Gene Ontologynucleolus1 4
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 5
GO:0005794
RCA
Gene OntologyGolgi apparatus6
GO:0009505
HDA
Gene Ontologyplant-type cell wall7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012606 Ribosomal protein S13/S15, N-terminal
IPR000589 Ribosomal protein S15
IPR009068 S15/NS1, RNA-binding
IPR023029 Ribosomal protein S15P
Mapman id Description
17.1.3.1.14 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS13