Gene: Sopen05g007820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g007820
  • Transcript Identifier Sopen05g007820.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 6635301-6638132 : positive

Gene Family Information

  • ID HOM05D000944
  • #Genes/#Species 636/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g007820.1

Descriptions

  • Description member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles. | VTI1B | CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal | BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT1G26670
GO:0006891
ISO
PLAZA Integrative Orthologyintra-Golgi vesicle-mediated transport AT1G26670
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT1G26670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
InterProSNAP receptor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G26670
GO:0005483
ISO
PLAZA Integrative Orthologysoluble NSF attachment protein activity AT1G26670
GO:0000149
ISO
PLAZA Integrative OrthologySNARE binding AT1G26670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005794
IEA
InterProGolgi apparatus
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G26670
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G26670
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT1G26670
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G26670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010989 SNARE
IPR027027 GOSR2/Membrin/Bos1
IPR007705 Vesicle transport v-SNARE, N-terminal
IPR000727 Target SNARE coiled-coil homology domain
IPR038407 Vesicle transport v-SNARE, N-terminal domain superfamily
Mapman id Description
22.3.5.1.2.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component