Gene: AT1G26670
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G26670
- Transcript Identifier AT1G26670.1
- Gene Type Coding gene
- Location Chr1 : 9216103-9217793 : positive
Gene Family Information
- ID HOM05D000944
- #Genes/#Species 636/100
- Phylogenetic origin
- ID ORTHO05D001661
- #Genes/#Species 373/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G26670.1
- symbol VTI1B
- uniprot Q9SEL5
Descriptions
- Description Vesicle transport v-SNARE family protein
- Computational description VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006906 | IBA | Gene Ontology | vesicle fusion | 1 |
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0006623 | IMP | Gene Ontology | protein targeting to vacuole | 2 |
| GO:0006891 | TAS | Gene Ontology | intra-Golgi vesicle-mediated transport | 3 |
| GO:0046907 | TAS | Gene Ontology | intracellular transport | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IEA | GOA Database | SNAP receptor activity | |
| GO:0005484 | IBA | Gene Ontology | SNAP receptor activity | 1 |
| GO:0005484 | IEA | InterPro | SNAP receptor activity | |
| GO:0000149 | IBA TAS | Gene Ontology | SNARE binding | 1 3 |
| GO:0005483 | TAS | Gene Ontology | soluble NSF attachment protein activity | 4 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | IDA IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA IBA | Gene Ontology | Golgi apparatus | 1 6 |
| GO:0005794 | IEA | InterPro | Golgi apparatus | |
| GO:0005768 | IDA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 6 |
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA TAS | Gene Ontology | trans-Golgi network | 3 6 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0031902 | IBA | Gene Ontology | late endosome membrane | 1 |
| GO:0005770 | TAS | Gene Ontology | late endosome | 3 |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 4 |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0012507 | IBA | Gene Ontology | ER to Golgi transport vesicle membrane | 1 |
| GO:0005789 | IBA | Gene Ontology | endoplasmic reticulum membrane | 1 |
| GO:0031201 | IBA | Gene Ontology | SNARE complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.2.1 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component |