Gene: Sopen05g007800

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g007800
  • Transcript Identifier Sopen05g007800.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 6624122-6625393 : positive

Gene Family Information

  • ID HOM05D000944
  • #Genes/#Species 636/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g007800.1

Descriptions

  • Description specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A. | non-ATPase subunit 9 (ATS9) | INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Proteasome component (PCI) domain , PCI/PINT associated module | BEST Arabidopsis thaliana protein match is: proteasome family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
ISO
PLAZA Homology (enrichment)vesicle-mediated transport HOM05D000944
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT1G29150
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G29150
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D000944
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G29150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G29150
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G29150
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D000944
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G29150
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G29150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR040773 26S proteasome regulatory subunit Rpn6, N-terminal
IPR000717 Proteasome component (PCI) domain
IPR040780 6S proteasome subunit Rpn6, C-terminal helix domain
Mapman id Description
19.2.5.2.2.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN6