Gene: Sopen05g001590
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g001590
- Transcript Identifier Sopen05g001590.1
- Gene Type Coding gene
- Location Spenn-ch05 : 476965-486941 : positive
Gene Family Information
- ID HOM05D000392
- #Genes/#Species 1262/41
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen05g001590.1
Descriptions
- Description Plant protein of unknown function (DUF936) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001584 | Integrase, catalytic core |
| IPR001878 | Zinc finger, CCHC-type |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR010341 | Protein of unknown function DUF936, plant |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR036397 | Ribonuclease H superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| Mapman id | Description |
|---|---|
| 20.1.5.4.2 | Cytoskeleton organisation.microtubular network.microtubule dynamics.cortical microtubule organisation.regulatory protein (CORD) |