Gene: Sopen04g033180
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g033180
- Transcript Identifier Sopen04g033180.1
- Gene Type Coding gene
- Location Spenn-ch04 : 74542840-74546115 : positive
Gene Family Information
- ID HOM05D000317
- #Genes/#Species 1458/96
- Phylogenetic origin
- ID ORTHO05D000032
- #Genes/#Species 3442/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g033180.1
Descriptions
- Description Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis. | ABERRANT TESTA SHAPE (ATS) | CONTAINS InterPro DOMAIN/s: Homeodomain-like , Myb, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0010158 | IEA | InterPro | abaxial cell fate specification | |
GO:0080060 | ISO | PLAZA Integrative Orthology | integument development | AT5G42630 |
GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G42630 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000976 | IEA | InterPro | transcription cis-regulatory region binding | |
GO:0003700 | ISO | PLAZA Homology (enrichment) | DNA-binding transcription factor activity | HOM05D000317 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G42630 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G42630 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.2.3 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP) |