Gene: Sopen04g033180

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g033180
  • Transcript Identifier Sopen04g033180.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 74542840-74546115 : positive

Gene Family Information

  • ID HOM05D000317
  • #Genes/#Species 1458/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g033180.1

Descriptions

  • Description Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis. | ABERRANT TESTA SHAPE (ATS) | CONTAINS InterPro DOMAIN/s: Homeodomain-like , Myb, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010158
IEA
InterProabaxial cell fate specification
GO:0080060
ISO
PLAZA Integrative Orthologyintegument development AT5G42630
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G42630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0000976
IEA
InterProtranscription cis-regulatory region binding
GO:0003700
ISO
PLAZA Homology (enrichment)DNA-binding transcription factor activity HOM05D000317

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G42630
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G42630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006447 Myb domain, plants
IPR009057 Homeobox-like domain superfamily
IPR044847 Transcription repressor KANADI
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)