Gene: Sopen04g027510

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g027510
  • Transcript Identifier Sopen04g027510.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 68878334-68889444 : positive

Gene Family Information

  • ID HOM05D002075
  • #Genes/#Species 321/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g027510.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Protein of unknown function (DUF677) | INVOLVED IN: N-terminal protein myristoylation | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015074
IEA
InterProDNA integration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR025724 GAG-pre-integrase domain
IPR007749 Protein of unknown function DUF677
IPR001584 Integrase, catalytic core
IPR036397 Ribonuclease H superfamily
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
Mapman id Description
35.1 not assigned.annotated