Gene: Sopen04g027090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g027090
  • Transcript Identifier Sopen04g027090.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 68405077-68409385 : positive

Gene Family Information

  • ID HOM05D000396
  • #Genes/#Species 1257/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g027090.1

Descriptions

  • Description embryo defective 1075 (emb1075) | FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity | INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain , Pyridoxal phosphate-dependent decarboxylase , Pyridoxal-phosphate binding site , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 | BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0006580
ISO
PLAZA Integrative Orthologyethanolamine metabolic process AT1G43710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0030170
IEA
InterPropyridoxal phosphate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G43710
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G43710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR002129 Pyridoxal phosphate-dependent decarboxylase
Mapman id Description
5.2.4.1.1 Lipid metabolism.glycerolipid biosynthesis.phosphatidylethanolamine.CDP-ethanolamine pathway.serine decarboxylase