Gene: Sopen04g026980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g026980
  • Transcript Identifier Sopen04g026980.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 68232717-68241369 : negative

Gene Family Information

  • ID HOM05D000189
  • #Genes/#Species 2040/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g026980.1

Descriptions

  • Description PRAF1 | FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 , Disease resistance/zinc finger/chromosome condensation-like region , Zinc finger, FYVE-type , Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Zinc finger, FYVE-related , Pleckstrin homology-type , Zinc finger, FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0005085
ISO
PLAZA Integrative Orthologyguanyl-nucleotide exchange factor activity AT1G76950
GO:0035091
ISO
PLAZA Integrative Orthologyphosphatidylinositol binding AT1G76950
GO:0070300
ISO
PLAZA Integrative Orthologyphosphatidic acid binding AT1G76950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000408 Regulator of chromosome condensation, RCC1
IPR000306 FYVE zinc finger
IPR027988 Transcription factor BREVIS RADIX, N-terminal domain
IPR013591 Brevis radix (BRX) domain
IPR011993 PH-like domain superfamily
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR001849 Pleckstrin homology domain
Mapman id Description
26.3.1.3 External stimuli response.gravity.sensing and signalling.regulatory protein factor (RLD)