Gene: AT1G76950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G76950
  • Transcript Identifier AT1G76950.1
  • Gene Type Coding gene
  • Location Chr1 : 28906952-28911325 : positive

Gene Family Information

  • ID HOM05D000189
  • #Genes/#Species 2040/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G76950.1
  • symbol PRAF1
  • uniprot Q947D2

Descriptions

  • Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
  • Computational description PRAF1; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1); Has 21693 Blast hits to 8422 proteins in 452 species: Archae - 63; Bacteria - 2065; Metazoa - 9089; Fungi - 1093; Plants - 3056; Viruses - 5; Other Eukaryotes - 6322 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IEA
GOA Databaseguanyl-nucleotide exchange factor activity
GO:0005085
IDA
Gene Ontologyguanyl-nucleotide exchange factor activity1
GO:0035091
IDA
Gene Ontologyphosphatidylinositol binding1
GO:0070300
IDA
Gene Ontologyphosphatidic acid binding1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0008289
IEA
GOA Databaselipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011993 PH-like domain superfamily
IPR001849 Pleckstrin homology domain
IPR000306 FYVE zinc finger
IPR000408 Regulator of chromosome condensation, RCC1
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR011011 Zinc finger, FYVE/PHD-type
IPR013591 Brevis radix (BRX) domain
IPR027988 Transcription factor BREVIS RADIX, N-terminal domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
26.3.1.3 External stimuli response.gravity.sensing and signalling.regulatory protein factor (RLD)