Gene: Sopen04g002090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g002090
  • Transcript Identifier Sopen04g002090.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 839786-840898 : positive

Gene Family Information

  • ID HOM05D000466
  • #Genes/#Species 1131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g002090.1

Descriptions

  • Description Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator. | related to ABI3/VP1 1 (RAV1) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Transcriptional factor B3 , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: ethylene response DNA binding factor 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR044800 B3 domain-containing transcription factor LEC2-like
IPR016177 DNA-binding domain superfamily
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.5.3 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (RAV/NGATHA)
15.5.7.5 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2-RAV)