Gene: Sopen03g036320

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g036320
  • Transcript Identifier Sopen03g036320.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 71083967-71091434 : positive

Gene Family Information

  • ID HOM05D001577
  • #Genes/#Species 406/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g036320.1

Descriptions

  • Description plastid transcriptionally active 17 (PTAC17) | LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like , Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal | BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G80480
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT1G80480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G80480
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT1G80480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
IPR003495 CobW/HypB/UreG, nucleotide-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036627 CobW-like, C-terminal domain superfamily
Mapman id Description
15.6.1.2.3.7 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC17