Gene: Sopen03g035930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g035930
  • Transcript Identifier Sopen03g035930.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 70776585-70777409 : positive

Gene Family Information

  • ID HOM05D000479
  • #Genes/#Species 1104/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g035930.1

Descriptions

  • Description Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: ribonuclease activity, nucleic acid binding | INVOLVED IN: RNA modification | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004535
IEA
InterPropoly(A)-specific ribonuclease activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G32070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030014
IEA
InterProCCR4-NOT complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006941 Ribonuclease CAF1
IPR012337 Ribonuclease H-like superfamily
IPR039637 CCR4-NOT transcription complex subunit 7/8/Pop2
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated