Gene: Sopen03g035520
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g035520
- Transcript Identifier Sopen03g035520.1
- Gene Type Coding gene
- Location Spenn-ch03 : 70416207-70416934 : negative
Gene Family Information
- ID HOM05D000841
- #Genes/#Species 709/94
- Phylogenetic origin
- ID ORTHO05D001553
- #Genes/#Species 390/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g035520.1
Descriptions
- Description Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. | SHINE 1 (SHN1) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010143 | ISO | PLAZA Integrative Orthology | cutin biosynthetic process | AT1G15360 |
| GO:0009873 | ISO | PLAZA Integrative Orthology | ethylene-activated signaling pathway | AT1G15360 |
| GO:0010166 | ISO | PLAZA Integrative Orthology | wax metabolic process | AT1G15360 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G15360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G15360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT1G15360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |