Gene: AT1G15360
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G15360
- Transcript Identifier AT1G15360.1
- Gene Type Coding gene
- Location Chr1 : 5283609-5284506 : positive
Gene Family Information
- ID HOM05D000841
- #Genes/#Species 709/94
- Phylogenetic origin
- ID ORTHO05D001553
- #Genes/#Species 390/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G15360.1
- symbol SHN1
- Alias AtSHN1,WIN1,WAX INDUCER 1
- full_name SHINE 1
- uniprot Q9XI33
Descriptions
- Description Integrase-type DNA-binding superfamily protein
- Computational description SHINE 1 (SHN1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25390.2); Has 5918 Blast hits to 5765 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 9; Fungi - 23; Plants - 5843; Viruses - 2; Other Eukaryotes - 35 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0009873 | TAS | Gene Ontology | ethylene-activated signaling pathway | 1 |
| GO:0010143 | IMP | Gene Ontology | cutin biosynthetic process | 2 |
| GO:0010166 | IMP | Gene Ontology | wax metabolic process | 3 |
| GO:0009414 | IMP | Gene Ontology | response to water deprivation | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IDA ISS TAS | Gene Ontology | DNA-binding transcription factor activity | 1 4 5 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IPI | Gene Ontology | sequence-specific DNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005622 | TAS | Gene Ontology | intracellular anatomical structure | 1 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |