Gene: Sopen03g034740

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g034740
  • Transcript Identifier Sopen03g034740.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69840353-69843477 : positive

Gene Family Information

  • ID HOM05D000944
  • #Genes/#Species 636/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g034740.1

Descriptions

  • Description Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. | SHOOT GRAVITROPSIM 4 (SGR4) | FUNCTIONS IN: receptor activity | INVOLVED IN: gravitropism, Golgi to vacuole transport, protein targeting to vacuole | LOCATED IN: in 7 components | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal | BEST Arabidopsis thaliana protein match is: vesicle transport V-snare 13
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT5G39510
GO:0075733
ISO
PLAZA Integrative Orthologyintracellular transport of virus AT5G39510
GO:0006896
ISO
PLAZA Integrative OrthologyGolgi to vacuole transport AT5G39510
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT5G39510
GO:0006891
ISO
PLAZA Integrative Orthologyintra-Golgi vesicle-mediated transport AT5G39630
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G39510
GO:0000149
ISO
PLAZA Integrative OrthologySNARE binding AT5G39630
GO:0005484
IEA
InterProSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G39510
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G39510
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G39510
GO:0000325
ISO
PLAZA Integrative Orthologyplant-type vacuole AT5G39510
GO:0016020
IEA
InterPromembrane
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G39510
GO:0030140
ISO
PLAZA Integrative Orthologytrans-Golgi network transport vesicle AT5G39510
GO:0005794
IEA
InterProGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010989 SNARE
IPR038407 Vesicle transport v-SNARE, N-terminal domain superfamily
IPR027027 GOSR2/Membrin/Bos1
IPR007705 Vesicle transport v-SNARE, N-terminal
Mapman id Description
22.3.5.1.2.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component