Gene: AT5G39510

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39510
  • Transcript Identifier AT5G39510.1
  • Gene Type Coding gene
  • Location Chr5 : 15822035-15823591 : positive

Gene Family Information

  • ID HOM05D000944
  • #Genes/#Species 636/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39510.1
  • symbol SGR4
  • Alias ATVTI11,VESICLE TRANSPORT V-SNARE 11,ATVTI1A,ITT3,IMPAIRED TONOPLAST TRAFFIC 3,VTI11,VESICLE TRANSPORT V-SNARE 11,VTI1A,ZIG,ZIG1
  • full_name SHOOT GRAVITROPSIM 4
  • uniprot Q9SEL6

Descriptions

  • Description Vesicle transport v-SNARE family protein
  • Computational description SHOOT GRAVITROPSIM 4 (SGR4); FUNCTIONS IN: receptor activity; INVOLVED IN: gravitropism, Golgi to vacuole transport, protein targeting to vacuole; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: vesicle transport V-snare 13 (TAIR:AT3G29100.1); Has 744 Blast hits to 742 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 276; Fungi - 144; Plants - 174; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006623
IMP
Gene Ontologyprotein targeting to vacuole1
GO:0006896
IGI
Gene OntologyGolgi to vacuole transport2
GO:0009630
IMP
Gene Ontologygravitropism3
GO:0075733
IMP
Gene Ontologyintracellular transport of virus4
GO:0006906
IBA
Gene Ontologyvesicle fusion5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
Gene OntologySNAP receptor activity5
GO:0005484
IEA
InterProSNAP receptor activity
GO:0000149
IBA
Gene OntologySNARE binding5
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0031201
IBA
Gene OntologySNARE complex5
GO:0043657
IEA
GOA Databasehost cell
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IBA
Gene OntologyGolgi apparatus5
GO:0005794
IEA
InterProGolgi apparatus
GO:0005774
IDA
IEA
GOA Databasevacuolar membrane
GO:0005774
HDA
Gene Ontologyvacuolar membrane6
GO:0005773
IDA
IEA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole7
GO:0000325
IDA
GOA Databaseplant-type vacuole
GO:0000325
HDA
Gene Ontologyplant-type vacuole8
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005770
IDA
TAS
Gene Ontologylate endosome2 9
GO:0005802
IDA
TAS
Gene Ontologytrans-Golgi network2 9
GO:0030140
IDA
Gene Ontologytrans-Golgi network transport vesicle3
GO:0005829
RCA
Gene Ontologycytosol10
GO:0009536
HDA
Gene Ontologyplastid11
GO:0012507
IBA
Gene OntologyER to Golgi transport vesicle membrane5
GO:0005789
IBA
Gene Ontologyendoplasmic reticulum membrane5
GO:0031902
IBA
Gene Ontologylate endosome membrane5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027027 GOSR2/Membrin/Bos1
IPR007705 Vesicle transport v-SNARE, N-terminal
IPR038407 Vesicle transport v-SNARE, N-terminal domain superfamily
IPR010989 SNARE
Mapman id Description
22.3.5.1.2.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component