Gene: Sopen03g029680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g029680
  • Transcript Identifier Sopen03g029680.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 65481335-65488748 : negative

Gene Family Information

  • ID HOM05D001300
  • #Genes/#Species 483/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g029680.1

Descriptions

  • Description Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. | NS1 | FUNCTIONS IN: asparagine-tRNA ligase activity | INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type , Asparaginyl-tRNA synthetase, class IIb , Aminoacyl-tRNA synthetase, class II, conserved domain , Aspartyl/Asparaginyl-tRNA synthetase, class IIb , Nucleic acid-binding, OB-fold-like , Aminoacyl-tRNA synthetase, class II (D/K/N) , Aminoacyl-tRNA synthetase, class II (D/K/N)-like | BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006421
IEA
InterProasparaginyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT4G17300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004816
IEA
InterProasparagine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G17300
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G17300
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G17300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR004522 Asparagine-tRNA ligase
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Mapman id Description
17.2.3 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase