Gene: Sopen03g028870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028870
  • Transcript Identifier Sopen03g028870.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 64641630-64648046 : negative

Gene Family Information

  • ID HOM05D005979
  • #Genes/#Species 131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028870.1

Descriptions

  • Description Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. | tubulin folding cofactor B | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: tubulin complex assembly, embryo development, cell division | LOCATED IN: nucleus, cytoplasm, phragmoplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT3G10220
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G10220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G10220
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G10220
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G10220
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT3G10220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036859 CAP Gly-rich domain superfamily
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR000938 CAP Gly-rich domain
Mapman id Description
20.3.3.1.2 Cytoskeleton organisation.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.cofactor (TFC-B)