Gene: Sopen03g028870
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g028870
- Transcript Identifier Sopen03g028870.1
- Gene Type Coding gene
- Location Spenn-ch03 : 64641630-64648046 : negative
Gene Family Information
- ID HOM05D005979
- #Genes/#Species 131/96
- Phylogenetic origin
- ID ORTHO05D007848
- #Genes/#Species 126/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g028870.1
Descriptions
- Description Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. | tubulin folding cofactor B | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: tubulin complex assembly, embryo development, cell division | LOCATED IN: nucleus, cytoplasm, phragmoplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT3G10220 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G10220 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G10220 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10220 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G10220 |
GO:0009524 | ISO | PLAZA Integrative Orthology | phragmoplast | AT3G10220 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
20.3.3.1.2 | Cytoskeleton organisation.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.cofactor (TFC-B) |