Gene: AT3G10220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G10220
  • Transcript Identifier AT3G10220.1
  • Gene Type Coding gene
  • Location Chr3 : 3161977-3164037 : positive

Gene Family Information

  • ID HOM05D005979
  • #Genes/#Species 131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G10220.1
  • symbol EMB2804
  • full_name EMBRYO DEFECTIVE 2804
  • uniprot Q67Z52

Descriptions

  • Description tubulin folding cofactor B
  • Computational description tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy1
GO:0051301
IMP
Gene Ontologycell division1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus3
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005737
HDA
Gene Ontologycytoplasm4
GO:0009524
IDA
GOA Databasephragmoplast
GO:0009524
HDA
Gene Ontologyphragmoplast4
GO:0005829
IDA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR000938 CAP Gly-rich domain
IPR036859 CAP Gly-rich domain superfamily
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
20.3.3.1.2 Cytoskeleton organisation.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.cofactor (TFC-B)