Gene: Sopen03g027900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g027900
  • Transcript Identifier Sopen03g027900.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 63445947-63455958 : positive

Gene Family Information

  • ID HOM05D004758
  • #Genes/#Species 154/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g027900.1

Descriptions

  • Description Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development. | TORMOZEMBRYO DEFECTIVE (TOZ) | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Small-subunit processome, Utp13 , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G16750
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G16750
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT5G16750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032040
IEA
InterProsmall-subunit processome
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G16750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR013934 Small-subunit processome, Utp13
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
17.1.3.2.1.3.4 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (TOZ)