Gene: Sopen03g027470

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g027470
  • Transcript Identifier Sopen03g027470.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 63047094-63054270 : negative

Gene Family Information

  • ID HOM05D006277
  • #Genes/#Species 127/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g027470.1

Descriptions

  • Description This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells. | brassinosteroid-insensitive4 (BIN4) | FUNCTIONS IN: double-stranded DNA binding | INVOLVED IN: in 7 processes | LOCATED IN: DNA topoisomerase complex (ATP-hydrolyzing), nucleus | EXPRESSED IN: cotyledon vascular system, cotyledon, root tip, leaf trichome, leaf
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042023
IEA
InterProDNA endoreduplication
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G24630
GO:0030307
ISO
PLAZA Integrative Orthologypositive regulation of cell growth AT5G24630
GO:0009913
ISO
PLAZA Integrative Orthologyepidermal cell differentiation AT5G24630
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G24630
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT5G24630
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT5G24630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IEA
InterProdouble-stranded DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009330
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G24630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033246 DNA-binding protein BIN4
Mapman id Description
13.3.5.2.1.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.accessory component MIDGET