Gene: Sopen03g023960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g023960
- Transcript Identifier Sopen03g023960.1
- Gene Type Coding gene
- Location Spenn-ch03 : 56404191-56409892 : negative
Gene Family Information
- ID HOM05D005321
- #Genes/#Species 143/91
- Phylogenetic origin
- ID ORTHO05D006360
- #Genes/#Species 144/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g023960.1
Descriptions
- Description LUC7 N_terminus domain-containing protein | FUNCTIONS IN: RNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: LUC7 related | BEST Arabidopsis thaliana protein match is: LUC7 related protein ., LUC7-related
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006376 | IEA | InterPro | mRNA splice site selection |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT5G51410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005685 | IEA | InterPro | U1 snRNP |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004882 | Luc7-related |
| Mapman id | Description |
|---|---|
| 16.2.1.1.5.2 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (LUC7) |