Gene: AT5G51410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G51410
  • Transcript Identifier AT5G51410.4
  • Gene Type Coding gene
  • Location Chr5 : 20881821-20883577 : negative

Gene Family Information

  • ID HOM05D005321
  • #Genes/#Species 143/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G51410.4
  • uniprot P94088

Descriptions

  • Description LUC7 N terminus domain-containing protein
  • Computational description LUC7 N_terminus domain-containing protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 11347 Blast hits to 6019 proteins in 331 species: Archae - 9; Bacteria - 137; Metazoa - 6515; Fungi - 1614; Plants - 1008; Viruses - 20; Other Eukaryotes - 2044 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006376
IEA
GOA DatabasemRNA splice site selection
GO:0006376
IBA
Gene OntologymRNA splice site selection1
GO:0006376
IEA
InterPromRNA splice site selection

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
TAS
Gene OntologyRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0003729
IEA
InterPromRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005685
IEA
GOA DatabaseU1 snRNP
GO:0005685
IBA
Gene OntologyU1 snRNP1
GO:0005685
IEA
InterProU1 snRNP
GO:0071004
IBA
Gene OntologyU2-type prespliceosome1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004882 Luc7-related
Mapman id Description
16.2.1.1.5.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (LUC7)