Gene: Sopen03g023900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g023900
  • Transcript Identifier Sopen03g023900.2
  • Gene Type Coding gene
  • Location Spenn-ch03 : 56318720-56325688 : negative

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g023900.2

Descriptions

  • Description xyloglucan endotransglycosylase-related protein (XTR6) | xyloglucan endotransglycosylase 6 (XTR6) | FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds | INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process | LOCATED IN: cell wall | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase , Xyloglucan endo-transglycosylase, C-terminal , Concanavalin A-like lectin/glucanase, subgroup , Concanavalin A-like lectin/glucanase , Glycoside hydrolase, family 16 , Glycoside hydrolase, family 16, active site | BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071669
ISO
PLAZA Integrative Orthologyplant-type cell wall organization or biogenesis AT4G30270
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT5G57560
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G57560
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT4G30270
GO:0009828
ISO
PLAZA Integrative Orthologyplant-type cell wall loosening AT4G30270
GO:0009612
ISO
PLAZA Integrative Orthologyresponse to mechanical stimulus AT5G57560
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G57560
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT4G30270
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT4G30270
GO:0009664
ISO
PLAZA Integrative Orthologyplant-type cell wall organization AT5G57560
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT4G30270
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0042546
IEA
InterProcell wall biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033946
ISO
PLAZA Integrative Orthologyxyloglucan-specific endo-beta-1,4-glucanase activity AT5G57530
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT4G30270
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G30270
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G30270
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G25810
GO:0048046
IEA
InterProapoplast
GO:0005618
IEA
InterProcell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR000757 Glycoside hydrolase family 16
IPR044791 Beta-glucanase/XTH
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase