Gene: AT4G30270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G30270
  • Transcript Identifier AT4G30270.1
  • Gene Type Coding gene
  • Location Chr4 : 14819445-14820448 : negative

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G30270.1
  • symbol XTH24
  • Alias MERI-5,MERISTEM 5,MERI5B,meristem-5,SEN4,SENESCENCE 4
  • uniprot P24806

Descriptions

  • Description xyloglucan endotransglucosylase/hydrolase 24
  • Computational description xyloglucan endotransglucosylase/hydrolase 24 (XTH24); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: aging, response to gibberellin stimulus, gibberellic acid mediated signaling pathway, response to brassinosteroid stimulus, plant-type cell wall loosening; LOCATED IN: cell wall, plasma membrane, cytoplasm, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2202 Blast hits to 2180 proteins in 308 species: Archae - 0; Bacteria - 283; Metazoa - 0; Fungi - 433; Plants - 1389; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0071555
IEA
GOA Databasecell wall organization
GO:0008152
IEA
GOA Databasemetabolic process
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0010411
IEA
Gene Ontologyxyloglucan metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0042546
IEA
Gene Ontologycell wall biogenesis
GO:0042546
IEA
InterProcell wall biogenesis
GO:0009739
IGI
Gene Ontologyresponse to gibberellin
GO:0009740
TAS
Gene Ontologygibberellic acid mediated signaling pathway
GO:0009741
IGI
Gene Ontologyresponse to brassinosteroid
GO:0009828
TAS
Gene Ontologyplant-type cell wall loosening1
GO:0071669
IMP
Gene Ontologyplant-type cell wall organization or biogenesis2
GO:0007568
IEP
Gene Ontologyaging3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016762
IEA
GOA Databasexyloglucan:xyloglucosyl transferase activity
GO:0016762
IDA
TAS
Gene Ontologyxyloglucan:xyloglucosyl transferase activity4
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004553
IEA
Gene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall6
GO:0005737
IDA
GOA Databasecytoplasm
GO:0005737
HDA
Gene Ontologycytoplasm7
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus8
GO:0005618
IDA
IEA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall7
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast
GO:0099503
HDA
Gene Ontologysecretory vesicle9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR000757 Glycoside hydrolase family 16
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR044791 Beta-glucanase/XTH
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase