Gene: Sopen03g023030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g023030
  • Transcript Identifier Sopen03g023030.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 54574822-54576780 : negative

Gene Family Information

  • ID HOM05D006156
  • #Genes/#Species 129/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g023030.1

Descriptions

  • Description embryo defective 1796 (emb1796) | FUNCTIONS IN: ATP binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Tetratricopeptide-like helical | BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT3G49240
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G49240
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT3G49240

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT3G49240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G49240
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G49240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated