Gene: Sopen03g023040

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g023040
  • Transcript Identifier Sopen03g023040.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 54578954-54581449 : positive

Gene Family Information

  • ID HOM05D002178
  • #Genes/#Species 308/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g023040.1

Descriptions

  • Description 40S ribosomal protein S12 - Hordeum vulgare (Barley), Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e , Ribosomal protein L7Ae/L30e/S12e/Gadd45 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G15930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G32060
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G32060
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT2G32060
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15930
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G32060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR000530 Ribosomal protein S12e
IPR029064 50S ribosomal protein L30e-like
Mapman id Description
17.1.3.1.13 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS12