Gene: Sopen03g012250
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g012250
- Transcript Identifier Sopen03g012250.1
- Gene Type Coding gene
- Location Spenn-ch03 : 19668237-19672479 : negative
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g012250.1
Descriptions
- Description Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029472 | Retrotransposon Copia-like, N-terminal |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR001584 | Integrase, catalytic core |
| IPR036397 | Ribonuclease H superfamily |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |